Showing posts with label Resistance. Show all posts
Showing posts with label Resistance. Show all posts

Defending Soybean: Screening Kenyan Varieties Against Rust Disease | InformativeBD

Screening of selected kenyan soybean varieties for resistance to Phakopsora pachyrhizi (Soybean rust)

H.A. Ogot,  S.A. Okoth,  G.O. Obiero, and J.M. Mahasi,  from the  different institute of Kenya. wrote a Research article about, Defending Soybean: Screening Kenyan Varieties Against Rust Disease. Entitled, Screening of selected kenyan soybean varieties for resistance to Phakopsora pachyrhizi (Soybean rust). This research paper published by the International Journal of Biosciences | IJB. an open access scholarly research journal on Biosciences. under the affiliation of the International Network For Natural Sciences| INNSpub. an open access multidisciplinary research journal publisher.

Abstract

Soybean (Glycine max (L.) Merrill.) is a highly nutritious plant which plays an important role in the world’s  economy, however soybean rust  disease caused by the fungus Phakopsora pachyrhizi is a major challange to the soybean industry.  The disease among other constraints  has significatly  affected crop yields in most soybean growing countries.  In this study  Seven  varieties of soybean (Nyala, Bossier, SB19, Hill, SB8, Gazelle and TGx1987-32F) commoly  grown by farmers  in Kenya were tested in the green house for resistance to soybean rust.  The varieties TGx1987- 32F and SB8 showed  resistant reactions  characterized by  red brown lesion with low level of disease severity,  low lesion number,  low sporulation level and low area under disease progress curve (AUDPC) value.  The other five varieties; Nyala, Bossier, SB19, Hill and Gazelle showed susceptible  reactions to  soybean rust producing tan lesion with profuse sporulation and high disease severity level. The Soybean varieties with low lesion densities, low disease severity and low sporulation level may be possible sources of rust resistance genes that can be used in breeding programs to produce rust resistant varieties.

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Introduction

The production of soybean in Kenya is affected by numerous biotic and abiotic factors. Some of the constraints include, low yielding varieties, lack of markets, poor agronomic practices, lack of awareness for its potential, competition with other legumes, drought, water logging, and pest and disease attacks (Hartman et al., 2011). Other factors include lack of varieties which are tolerant midseason moisture stress and high yielding varieties tolerant to low phosphorus (FAO, 2005). Among the biotic factors affecting soybean production diseases are of great concern because of their final impact on yield. There are a number of diseases that infect soybean worldwide the most common disease are Anthracnose, bacterial blight, bacterial pustule, soybean rust, bean pod mottle virus, brown stem rot, charcoal rot , frog eye leaf spot, soybean cyst nematode and soybean mosaic virus among others (Ploper,1997).

Soybean rust caused Phakopsora pachyrhizi as been identified among other diseases as the major challenge to soybean production worldwide. Phakopsora pachyrhizi belongs to the fungal phylum Basidiomycota, class Urediniomycetes and order Uredinales, which produce uredinia, on “dome-like” structures that give rise to asexual urediniospores. Hair-like hyaline hyphae called paraphyses grow inside uredinia. Paraphyses and sporophores are base structures for urediniosopore production (Bromfield, 1984). P. meibomiae is less aggressive while P. pachyrhizi is more aggressive and infects over 95 species of plants from more than 42 genera, including soybean and related Glycine species (Bromfield, 1984). The most susceptible host of P. pachyrhizi is kudzu (Pueraria lobata (Wild.) Ohwi), a weed species that is commonly found in the United States of America. Other common hosts are medic (Medicago arborea L.), lupine (Lupinus hirsutus L.), sweet clover (Melilotus officinalis (L.) Lam), vetch (Vicia dasycarpa Ten), common beans (Phaseolus vulgaris L.), lima and butter beans (Phaseolus lunatus L.), pigeonpea (Cajanus cajan (L.) Millsp), garden peas (Pisum sativum L.) and cowpeas (Vigna unguiculata) (Bromfield, 1984). Soybean rust infection process begins in the low to mid-canopy and moves up the plant. The infection process starts with urediniospores germination to produce a single germ tube that grows across the leaf surface, until an appressorium is formed. Penetration of epidermal cells is direct through the cuticle by an appressorial peg (Miles et al., 2005). During the infection process intracellular invasion of the leaf occurs once hyphae are formed within the mesophyll layer. Within 5 to 7 days volcano shaped uredinia with round ostioles are produced which release urediniospores on the abaxial surface completing the asexual reproduction cycle (Goellner et al., 2010).

The rapid spread of the disease in the continent of Africa has led to major decline in soybean yield (Levy, 2005, Oloka et al., 2008). Losses due to soybean rust can be significantly high. In South Africa losses of 10- 80% have been reported and in areas under monocropping system the losses can be as high as 100%. India has experienced losses of 10-90%, Japan 40% and Taiwan has reported losses of 23-90% in (Hartman et al., 1999). It is therefore important that the major production constraints be addressed so as to improve the crop yield to be able to meet the market demands and sustain the production industries. To control the spread of the rust disease chemical fungicides and cultural practices are used howerever the use fungicides to control the disease commercial plantings significantly increases production costs it is therefore not a feasible option in small scale soybean plantings especially in developing countries (Miles et al., 2003). Furthermore the fungicides are expensive and are not very effective at preventing epidemics as Bonde et al., (2006) noted yield losses of up to 50% under severe rust epidemics with chemical control. Other legumes that also form an integral part of the cropping system such as cowpea, pigeon pea and common beans are functional alternative hosts of P. pachyrhizi which makes control a great challenge (Anon, 2007; Slaminko et al., 2008). Cultural practices like destruction of alternate hosts, timely irrigation, early planting and growing early maturing cultivars can also reduce the incidence of the disease (Akinsanmi et al., 2001). However, the rapid spread by wind-borne urediniospores and the large number of host species increases chances of soybean rust survival making cultural practices relatively ineffective (Hartman et al., 2005).

Planting of disease resistant cultivars is the most viable way to manage soybean rust disease. To identify rust resistant cultivars soybean plants must be screened for resistance to diverse pathogen populations (Twizeyimana et al., 2007). This study therefore aims at screening selected soybean varieties commonly grown in Kenya for resistance to soybean rust isolates under green house conditions.

Reference

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Anon. 2007. Hosts of Phakopsora pachyrhizi, the Casual Organism of Soybean Rust in South America. Japan International Research Center for Agricultural Sciences (JIRCAS) Newsletter for International Collaboration JIRCAS, Tsukuba, Ibaraki, Japan.

Bonde M, Nester S, Austin C. 2006. Evaluation of virulence of Phakopsora pachyrhizi and Phakopsora meibomiae isolates. Plant Disease 90, 708–16.

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Garcia A, Calvo E, de Souza Kiihl  R, Harada A, Hiromoto D, Vieira L. 2008. Molecular mapping of soybean rust (Phakopsora pachyrhizi) resistance genes: discovery of a novel locus and alleles. Theoretical Applied Genetics 117, 545-553.

Goellner K, Loehrer M, Langenbach C, Conrath U, Koch E, Schaffrath U. 2010. Phakopsora pachyrhizi, the causal agent of Asian soybean rust. Molecular Plant Pathology 11, 169-177.

Hartman GL, Bonde MR, Miles MR, Frederick RD. 2004. Variation of Phakopsora pachyrhizi isolates on soybean. The Proceedings: VII World Soybean Research Conference, Foz do Iguassue, PR, Brazil: 440-446.

Hartman GL, Miles  MR, Frederick  RD. 2005a. Breeding for resistance to soybean rust. Plant Dis. 89, 664–666.

Hartman GL, Miles MR, Frederick RD. 2005b. Historical viewpoint and soybean resistance to soybean rust. In Proceedings of the 2005 Illinois Crop Protection Conference, pp. 16 – 20. Available Online at: www.ipm.uiuc.edu/education/proceedings/index.html

Hartman GL, West ED, Herman TK. 2011. Crops that feed the World Soybean worldwide production, use, and constraints caused by pathogens and pests. Food Security 3, 5-17.

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Kumudini S, Prior E, Omielan J, Tollenaar T. 2008. Impact of Phakopsora pachyrhizi infection on soybean leaf photosynthesis and radiation absorption. Crop Science 48, 2343-2350.

Levy C. 2005. Epidemiological and chemical control of soybean rust in southern Africa. American. Phytopathological journal 89(4), 669-674.

Njoroge NJ, Owouche JO, Oyoo ME. 2015. Evaluation of soybean [Glycine max(L.)Merr.] genotypes for  agronomic and quality traits  in Kenya. African Journal of Agricultural  Research 10(12), p 1474- 1479,  http://dx.doi.org/10.5897/AJAR2014.9168

Oloka HK, Tukumahabwa P, Sengooba T,  Shanmagasundram S. 2008. Reaction of exotic soybean germplasm to Phakopsora pachyhrizi in Uganda. Plant Disease 92(11), 1493-1496. http://dx.doi.org/10.1094/PDIS-92-11-1493

Pham TA, Miles MR, Frederick RD, Hill CB, Hartman GL. 2009. Differential responses of resistant soybean entries to isolates of Phakopsora pachyrhizi. Plant Disease 93, 224-228.

Mahasi JM, Vanlauwe B, Mursoy RC, Mbehero P, Mukalama J. 2009. Increasing productivity of soybean in Western Kenya through evaluation and farmers participatory variety selection, pp. 326-334 12th KARI biannual conference, Nairobi, Kenya.

Mahasi JM, Vanlauwe B, Mursoy RC, Mbehero P, Mukalama J. 2011. A sustainable  approach to increased soybean production in western Kenya.  African crop science conference proceedings 10, 111-116.

Miles MR, Morel W, Ray JD, Smith JR, Frederick RD, Hartman GL. 2008. Adult plant evaluation of soybean accessions for resistance to Phakopsora pachyrhizi in the field and greenhouse in Paraguay. Plant Disease 92, 96-102.

Miles  MR, Bonde  MR, Nester SE, Berner DK, Frederick RD, Hartman GL. 2011. Characterizing resistance to  Phakopsora  pachyrhizi in soybean.  Plant Dis. 95, 577-581.

Miles MR, Frederick RD, Hartman GL. 2006. Evaluation of soybean germplasm for Resistance to Phakopsora pachyrhizi. Online. Plant Health Progress http://dx.doi.org/10.1094/PHP-2006-0104-01-RS.

Miles MR, Rosenblatt I, Traynor P, Hartman GL. 2005. Severity assessment for soybean rust. Proceedings of the National Soybean Rust Symposium, Nov. 14-16, 2005, Nashville, TN. Plant Management Network. Online publication.

Miles MR, Frederick RD, Hartman GL. 2003 Soybean rust: is the U.S. crop at risk? APSnet Feature, American Phytopathological Society. Online publication.

Ploper LD. 1997. Evolution, impact and current status of soybean diseases in Argentina. In World Soybean Research Conference V: Proceedings, B. Napompeth (Ed.), Kasetsart  University Press, p 239- 242.

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Slaminko TL, Miles MR, Frederick  RD, Bonde MR, Hartman GL. 2008. New legume hosts of Phakopsora pachyrhizi based on greenhouse evaluations. Plant Disease 92, 767-771.

Twizeyimana M, Ojiambo PS, Sonder K, Ikotun T, Hartman GL, Bandyopadhyay R. 2009. Pathogenic variation of Phakopsora pachyrhizi infecting soybean in Nigeria  Phytopathology 99, 353-361.

Twizeyimana M, Ojiambo PS, Ikotun T, Paul C, Hartman GL, Bandyopadhyay R. 2007 Comparison of field, greenhouse, and detached-leaf evaluations of soybean germplasm for resistance to Phakopsora pachyrhizi. Plant Dis. 91, 1161-1169.

Wanderi SW. 2012. Genetic analyses for resistance to soybean rust (Phakopsora pachyrhizi) and yield stability among soybean genotypes in Kenya.  PhD thesis University of KwaZulu-Natal.

Yamanaka N, Yamaoka Y, Kato M, Lemos NG, Passianotto, ALL, Santos JVM, Benitez ER, Abdelnoor RV, Soares  RM,  Suenaga K. 2010. Development of classification criteria for resistance to soybean rust and differences in virulence among Japanese and Brazilian rust populations. Tropical Plant Pathology 35, 153-162.

Article source : Screening of selected kenyan soybean varieties for resistance to Phakopsora pachyrhizi (Soybean rust) 

Battling Bacterial Blight: How Rice Varieties and Wild Species Fight Back | InformativeBD

Resistance Characterization of Cultivated Varieties and Rice Wild Species in Response to Bacterial Blight

Abdul Waheed,  Habib Ahmad,  Fida. M. Abbasi,  Azhar H. Shah,  Hamid Ali,  F. S. Hamid, and Saqib Mumtaz,  from the different institute of  Pakistan. wrote a Research Article about, Battling Bacterial Blight: How Rice Varieties and Wild Species Fight Back. Entitled, Resistance Characterization of Cultivated Varieties and Rice Wild Species in Response to Bacterial Blight. This research paper published by the Journal of Biodiversity and Environmental Sciences | JBES. open access scholarly research journal on Biodiversity. under the affiliation of the International Network For Natural Sciences| INNSpub. an open access multidisciplinary research journal publisher.

Abstract

Bacterial leaf blight (BB) of rice caused by (Xanthomonas oryzae pv oryzae) is converting into a critical threat almost in all rice growing countries of the world. In order to catagorize resistant sources to virulent isolates of BB, an experiment comprising 02 species of wild rice (Oryza sp.) and four most common cultivated varieties i.e., Bas-385 , Swat-1 , JP-5 and Fakhar Malakand of rice in Pakistan was conducted in the green house of Genetic Department Garden campus ,Hazara University in the rice growing season during 2012. Bacterial suspension of concentration 108 CFU/ml was prepared from mixture of (Xanthomonas oryzae pv oryzae) prevailing in Khyber Puktunkhawa,Pakistan i.e., X00-1, X00-2 and X00-3. Clip method of artifical inoculation was used. Both tested wild relatives of rice O. longistaminata and O. rufipogon showed highly resistance to all the isolate. F3 genotypes Bas-385 x O. rufipogon was found highly susceptible to most of the isolates among all others genotypes. The use of resistant wild species O. rufipogon is therefore recommended in rice breeding program for transfer of bacterial blight resistant genes to cultivated varieties to enhance the relative characters.

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Introduction

Rice (Oryza sativa L.) is known as a staple food for more than half of the world’s population (Chakravarthi & Naravaneni, 2006). Pakistan is an important rice growing and exporting country. Pakistani Basmati rice is famous for long grain aromatic character all over the world. International Rice Research Institute reported that, export share of Pakistani rice was 10 % of the total world rice trade (IRRI, 1993).

Many diseases of rice crop significantly reduce the yield and quality all over the world, among them the bacterial blight (BB) of rice caused by Xanthomonas oryzae pv. oryzae (Akhtar, 2005) is the most destructive and critical disease of rice throughout the world (Mew, 1987). This disease was first observed by farmers in Japan during 1884-85 and its occurrence has been reported in Australia, Bangladesh, India, Mainland China, Malaysia, SriLanka, Thailand, Philippines, USA, West Africa and Vietnam (Ezuka & Kaku, 2000). Mew & Majid, 1977) reported its incidence in Pakistan and it was confirmed from all the provinces in a later study (Akhtar & Akram, 1987). Recently an alarming increase in BB incidence is observed in Pakistan especially in Punjab which is largest growing province of Pakistan and famous for rice cultivation (Khan et al., 2000 & Akhtar et al., 2003). Bacterial blight appears at all growth stages of rice and is manifested by either leaf blight or “Kresek” symptoms. The causal organism invades plants through water pores and wounds (Tabei & Mukoo, 1960). Since the water pores are located at the margins of upper parts of the leaf, the lesion starts from the leaf margins near its tip. As the disease progresses, the tiny water soaked lesions turns yellow, enlarges in size progressively and develop into an elongated irregular lesion with wavy margins. Bacterial ooze, which consists of small, yellowish, spherical masses, may sometimes be seen on the margins or veins of the freshly infected leaf under moist conditions. with the passage of time, the lesion may cover the entire blade, which turns white and later greyish owing saprophytic growth (Ou, 1985).

Resistance Characterization of Cultivated Varieties and Rice Wild Species in Response to Bacterial Blight

If plant ever produces panicles, it results in sterile immature grains, which are easily broken during milling. The reduction in yield in case of severe infection could be as high as 50% (Mew et al., 1993) whereas 10-12% yield reduction has been recorded in case of mild infection (Ou, 1985). The disease is also characterized by a systemic infection phase, which is manifested by acute wilting of young plants. This is commonly referred to as “Kresek” phase. The causal organism consists of straight rods, with a single polar flagellum, occurring singularly, in pairs and sometimes in chains as well and is also Gramnegative (Swings et al., 1990). The bacterium over winters either in weeds or in soil. Grains, straw and rice stubble are other possible sites of over wintering of the pathogen. During growing season, it enters the plants via natural opening or wounds where it survives and multiplies in plant’s vascular system, producing typical leaf blight symptoms.

Bacterial bight has the potential to become a destructive disease of rice in Pakistan. Generally, the use of resistant cultivars is the most effective method for controlling plant diseases. However, the available rice germplasm in the country is susceptible to virulent isolates of bacterial blight (Akhtar, 2005). Rice productivity is limited by several biotic and abiotic stresses. Thus, there is an urgent need to wide extent the gene pool of cultivated rice. Rice wild species are an important source of variability for resistance to all major diseases, insects and pests, offered an important source of innovative resistance genes for rice crop improvement (Eizenga et al., 2009). Wide hybridization between Oryza sativa (AA genome) and wild species of rice is one of the important way to transfer genes to cultivated rice. Apart from other research innovation some useful important genes have successfully been transferred from wild species of rice into cultivated rice to date which include genes for resistance to grassy stunt virus, bacterial blight, brown plant hopper, blast (Brar and Khush, 1997). The present study was, therefore, aimed to identify sources of resistant genes to virulent isolates of bacterial blight in wild relatives for future use in rice breeding programs.

Reference

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Article sourceResistance Characterization of Cultivated Varieties and Rice Wild Species in Response toBacterial Blight